BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D11LP1|AL429571
(505 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 971 0.0
3x_Contig1461 551 e-157
>3x_Contig1530
Length = 6216
Score = 971 bits (483), Expect = 0.0
Identities = 494/505 (97%)
Strand = Plus / Plus
Query: 1 cgatgatttctttgccttgcacaatatagaaggataagaataaggcgtctttttggcgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5180 cgatgatttctttgccttgcacaatatagaaggataagaataaggcgtctttttggcgtc 5239
Query: 61 gctgaaccatagcaggstggsaacggkgctcttagcggaaaggstttgggkgcttgccgg 120
|||||||||||||||| ||| ||||| |||||||||||||||| |||||| |||||||||
Sbjct: 5240 gctgaaccatagcaggctggcaacggtgctcttagcggaaaggctttgggtgcttgccgg 5299
Query: 121 cgaattgcaatgtcattttgcgcaaggrtaaatcatttgtatacgacttaaatgtacaac 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5300 cgaattgcaatgtcattttgcgcaaggataaatcatttgtatacgacttaaatgtacaac 5359
Query: 181 agggtattgtaagcmgtagagtagccttgttgttacgatctgctgagattaagccttcgt 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5360 agggtattgtaagcagtagagtagccttgttgttacgatctgctgagattaagccttcgt 5419
Query: 241 tgtctgatttgttactttctaggktggkggaagacaggkgtcttctccgatgtagagatt 300
||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||
Sbjct: 5420 tgtctgatttgttactttctaggttggtggaagacaggtgtcttctccgatgtagagatt 5479
Query: 301 aattaattgattgacttttttattttatgatgtctttatattttacattacttaaaacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5480 aattaattgattgacttttttattttatgatgtctttatattttacattacttaaaacca 5539
Query: 361 ctttcttcgttctcttttgaagctacctgagactttttgttgttttctttctctataaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5540 ctttcttcgttctcttttgaagctacctgagactttttgttgttttctttctctataaag 5599
Query: 421 tatttgattatttgattattagattattattatcatcatcgcatcgacatttgttttttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5600 tatttgattatttgattattagattattattatcatcatcgcatcgacatttgttttttt 5659
Query: 481 ttttttttttttttttttttgkcgc 505
||||||||||||||||||||| |||
Sbjct: 5660 ttttttttttttttttttttgtcgc 5684
>3x_Contig1461
Length = 5478
Score = 551 bits (274), Expect = e-157
Identities = 333/356 (93%)
Strand = Plus / Minus
Query: 150 aaatcatttgtatacgacttaaatgtacaacagggtattgtaagcmgtagagtagccttg 209
||||||||| || || |||||||| ||||||| |||| ||| | || | |||||||
Sbjct: 5062 aaatcatttttaaactacttaaatttacaacattttattttaatcattatattagccttt 5003
Query: 210 ttgttacgatctgctgagattaagccttcgttgtctgatttgttactttctaggktggkg 269
|| ||||||||||||||||||||||| ||||||||||||| |||||||||||| ||| |
Sbjct: 5002 tttttacgatctgctgagattaagcccccgttgtctgattttttactttctaggttgggg 4943
Query: 270 gaagacaggkgtcttctccgatgtagagattaattaattgattgacttttttattttatg 329
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4942 gaagacaggtgtcttccccgatgtagagattaattaattgattgacttttttattttatg 4883
Query: 330 atgtctttatattttacattacttaaaaccactttcttcgttctcttttgaagctacctg 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4882 atgtctttatattttacattacttaaaaccactttcttcgttctcttttgaagctacctg 4823
Query: 390 agactttttgttgttttctttctctataaagtatttgattatttgattattagattatta 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4822 agactttttgttgttttctttctctataaagtatttgattatttgattattagattatta 4763
Query: 450 ttatcatcatcgcatcgacatttgtttttttttttttttttttttttttttgkcgc 505
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 4762 ttatcatcatcgcatcgacatttgtttttttttttttttttttttttttttgtcgc 4707
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,002
Number of Sequences: 1807
Number of extensions: 26002
Number of successful extensions: 8551
Number of sequences better than 1.0e-20: 2
length of query: 505
length of database: 10,358,551
effective HSP length: 16
effective length of query: 489
effective length of database: 10,329,639
effective search space: 5051193471
effective search space used: 5051193471
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 49 (99.0 bits)